BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017D11SP1|AL427163
(991 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1693 1930 0.0
>3x_Contig1693
Length = 15531
Score = 1930 bits (973), Expect = 0.0
Identities = 984/987 (99%), Gaps = 1/987 (0%)
Strand = Plus / Plus
Query: 1 ggtggtatcatcttctgatccagtcagtaagacaattactatttttttatttcatataag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2227 ggtggtatcatcttcggatccagtcagtaagacaattactatttttttatttcatataag 2286
Query: 61 tatatatattacccgtaacgaggtgttttaacaaaccttagaaacctaaagattttagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2287 tatatatattacccgtaacgaggtgttttaacaaaccttagaaacctaaagattttagca 2346
Query: 121 agttcaacttgacctgtctttcgaattccggtctattgtctctccatagaatgcaagcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2347 agttcaacttgacctgtctttcgaattccggtctattgtctctccatagaatgcaagcgt 2406
Query: 181 cgatgttagctccagactcaatgtttggttcacttaggatactcatcacactgagcaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2407 cgatgttagctccagactcaatgtttggttcacttaggatactcatcacactgagcaata 2466
Query: 241 tcatttcgacgctttgaactggtgaccatctctcacactcgtgttcgtacatatttggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2467 tcatttcgacgctttgaactggtgaccatctctcacactcgtgttcgtacatatttggat 2526
Query: 301 cagacccaggagagtgaagaatggatatacacacttcaccgttaggatagatattaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2527 cagacccaggagagtgaagaatggatatacacacttcaccgttaggatagatattaggat 2586
Query: 361 gtagaatactaggttggaacgtaagttttggaggattcaatggataatctttagggaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2587 gtagaatactaggttggaacgtaagttttggaggattcaatggataatctttagggaaat 2646
Query: 421 ccaatcttgcattgaagacgccaccttcgtagcaggaatccggtggacccatgatcaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2647 ccaatcttgcattgaagacgccaccttcgtagcaggaatccggtggacccatgatcaaac 2706
Query: 481 aatcccactggaacaaattcgaatcatcaatcggactggcgagtattccctctgggctat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2707 aatcccactggaacaaattcgaatcatcaatcggactggcgagtattccctctgggctat 2766
Query: 541 ccttagtcaatttctctagttctttcaacaaacgtttctgtgcagtcttggacattgtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2767 ccttagtcaatttctctagttctttcaacaaacgtttctgtgcagtcttggacattgtat 2826
Query: 601 gctcaacccagttaacttgtgaacaccgtactctctatgcttttacaaactctttatctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2827 gctcaacccagttaacttgtgaacaccgtactctctatgcttttacaaactctttatctg 2886
Query: 661 cagagtatattgtaaccttgtttgtatgtgtcattatcatcattttcgtcaataacttta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2887 cagagtatattgtaaccttgtttgtatgtgtcattatcatcattttcgtcaataacttta 2946
Query: 721 tacactttcagatattagttaatgtggtgtaagaaaagtatcagccaacagagatataat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2947 tacactttcagatattagttaatgtggtgtaagaaaagtatcagccaacagagatataat 3006
Query: 781 ggtggtggaactgtgccgaacatgatacacctcgatcacgtattgacatgatgtttaaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3007 ggtggtggaactgtgccgaacatgatacacctcgatcacgtattgacatgatgtttaaca 3066
Query: 841 ctcaactacctggtggtatcgattggtttgaacgaagatgggaagtcacgtgattaatgt 900
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3067 ctcaactacctggtggtatcgattggtttgaacgaagat-ggaagtcacgtgattaatgt 3125
Query: 901 gctgttcacatcttatccgttacctacgcgatatcacagatctctggcaaatgcctcatg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3126 gctgttcacatcttatccgttacctacgcgatatcacagatctctggcaaatgcctcatg 3185
Query: 961 tgtgtgtgtattatacttagaagamcc 987
|||||||||||||||||||||||| ||
Sbjct: 3186 tgtgtgtgtattatacttagaagaacc 3212
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7381
Number of Sequences: 1807
Number of extensions: 7381
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 991
length of database: 10,358,551
effective HSP length: 16
effective length of query: 975
effective length of database: 10,329,639
effective search space: 10071398025
effective search space used: 10071398025
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)